Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015822110.1_cds_XP_016500982.1_14760
CDS Infomation

[gene=LOC107819393] [db_xref=GeneID:107819393] [protein=F-box protein At5g03100-like] [protein_id=XP_016500982.1] [location=join(25504..26415,27883..28053,28855..29169)] [gbkey=CDS]
Sequence

ATGGAAATGGAGAGGAAAGTCATGGCGAGAGGAGACAGACTCAGCGATTTGCCCGACGCA
ATTCTACTCCATATCCTCTCTATGTTGTTGTGGGACAGTAAAGCAGTTGTGAGAACCAGC
GTATTATCTCAGCGATGGCGGTTTCTTTGGAAGTCCGTGCCAGTATCTCTCGATTTTGAG
TCCCCCAATAGCTACAGCGAAAAGGATTTCATAGCTTCCACCAATAGAGAGCTTTATTAT
TGGAGGTCTTGCCAGAAAATCAGAAGATTCAGGGGATCACTCTTTAGGTACGACAATAGT
TATGTTAAAGATGTTGATTTATGGGTACATTTTGCAACTAAAGTTGCTAATGTTGAAGAA
CTTACACTTCTATTTGATTCGGACAATCACCCAAAATATGAGCTTCCTAATTTTGCATAT
AAGAATACGTTGTTGAGGAGTTTGATTTTAATCAACTGTGAACTGAAACCTTCTGGTAGT
GTTAACTGGAATAGTCTAGTATTTCTTTCAATCGCGTCCCTGAACTTGACGGATAATATG
TTGGAGAAGATATTATCCGGTTGCCCTAACTTGGAGCACTTGGAACTGGATTGTGTTTTG
GGCATTAGTCGTTTGGAAATCAGCTCTGTGAAGCTGACATTTTTGAGTCTAAAAGATTAC
CAAAATAAGAATCCTGACTTGTCTCCCCTCGAAATATTAGCCCCCCATATTAAATATTTT
GAACTTTTGGGGTTCTGCAATGAGATACGCTTGAGAAATGTGGCTTCACTTGTCAGTGCA
ATATTATCTTCAAATTTTGACTATATAGTAGATGAAGAACGCAACTCGGAGGCGGAGGAT
GGCTATTTGAAGGAGTTTCTTCATATTGTTGCCTATGTCGAGGATCTTGAATTGGGTCCC
TGGGGCATCGAGTGCCTTTCCATACTGGAGTTGAAAGGCTGGCAATCTCCACCATCAAGC
CGGAAATATTTAAAACTTGACACAGCCTTAGAACAATTGGACTTCCTTGGAATTTGCAGC
TTTCTACAGAGTTCGCCGGATCTTGAGACATTGGTCATTGACTGGTATAATAAAAAACGA
AGAGACCTGCTGTCAAGGTACACAAATGAGGATGAACACATTAAGAGGTTCAAGACACAT
AATTATAATTGCTCTTTGCTACATTTGAAGACCATCAAGATCATTGACTATGATGGAACA
CTAAGTGGGAATAAGTCTGTACTTCCATTGGTAAAATATTTGCTCAAAAATGCAACAATG
CTAGAAAAGTTCGTCATTACGGCCAAATTCGAAGGGAGTGATATGTCTCAGGATTATGTC
AAAATGGCACAAGAGTTCCAAAGCTTTCCAAGAGCCTCTCTGCATGCTGAGTTGTCTTTT
CTTATGGATAATTCTTGA

Peptide Sequence

PEP ID

XP_016500982.1
PEP Infomation

PREDICTED: F-box protein At5g03100-like [Nicotiana tabacum]
Sequence

MEMERKVMARGDRLSDLPDAILLHILSMLLWDSKAVVRTSVLSQRWRFLWKSVPVSLDFE
SPNSYSEKDFIASTNRELYYWRSCQKIRRFRGSLFRYDNSYVKDVDLWVHFATKVANVEE
LTLLFDSDNHPKYELPNFAYKNTLLRSLILINCELKPSGSVNWNSLVFLSIASLNLTDNM
LEKILSGCPNLEHLELDCVLGISRLEISSVKLTFLSLKDYQNKNPDLSPLEILAPHIKYF
ELLGFCNEIRLRNVASLVSAILSSNFDYIVDEERNSEAEDGYLKEFLHIVAYVEDLELGP
WGIECLSILELKGWQSPPSSRKYLKLDTALEQLDFLGICSFLQSSPDLETLVIDWYNKKR
RDLLSRYTNEDEHIKRFKTHNYNCSLLHLKTIKIIDYDGTLSGNKSVLPLVKYLLKNATM
LEKFVITAKFEGSDMSQDYVKMAQEFQSFPRASLHAELSFLMDNS

Transcript Sequence

Gene sequence data has not been registered.